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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015839482.1_cds_XP_016507311.1_20450
CDS Infomation

[gene=LOC107824997] [db_xref=GeneID:107824997] [protein=zingipain-1-like] [protein_id=XP_016507311.1] [location=join(56331..56769,57023..57609)] [gbkey=CDS]
Sequence

ATGGCATTGAAATTTTGCAGGTTAAGCCTTGTTGCAATTTTGCTAGTGGTCGGAATTTTT
GGGTTCCAGGCCACATCCCGTGACTTGCAGGTGTATTCCATGCTCGAAAGGCATGAAAAA
TGGATGAGCAACCATGGACGTGTGTATAAAGATGATGTTGAAAAGGCAAAGCGATTCAAC
ATATTTAAAGAACATGTCGACTTTATCGACTCTTTCAATAATGATGCAACTCATTCTTAC
CAGCTTGGCCTCAATAAATTTGCAGATCTTACTAACGAGGAGTTCCAATCTATGGTTGGT
AAATATAATAATCTATCTTTCATTCCAAAGACATCAAATTTGCAACCATTCAGCTACGAA
AGTAAAATTACCATTCCTGATAGTTGGAACTGGAGAGAGAAAGGTGCTGTTACTGACGTC
AAAGACCAGGGTAGATGTGGGTCATGTTGGGCATTTTCTGCAGTAGCAGCAGTGGAAGGA
ATAAACCAGATAAAAACTGGTGATTTGGTTTCACTATCTGAACAACAACTTCTAGATTGC
GAGAACACAAATAACGATGGTTGTGGGGGTGGTATCAGGACTGAAGCATTTGAATACATA
GCTGAAAACGGAGGTCTCACAACAGAATCAAATTACCCATACACAGGAATCCCGGGGACA
TGCGATAGTCAAAAGGCAGAATCAAGTGTAGTTACAATATCAGGATACAGAAGTGTGGAT
GCAAGTGAATCAGCACTGTTACAGGCAGTGGCAAATCAGCCAGTCTCTGCAGGTATTACT
ATCGGCAGTGATGAATTTCGCTTTTACAACGGTGGAATTTTCAATGGGAAATGTGGGATG
ACTTCGCGTCATGCAGTGACAGTGGTAGGGTATGGAACAAGTACTGAGGATGGAATTAAC
TATTGGTTGGTGAAGAATTCATGGGGAGAGAAATGGGGTGAAGGTGGATTTATGAGAATG
GCTAGAGATATTGAAGATGGTGGAGTTTGTGGCCTTGCTACTCGGGCTTCTTTCCCTACT
GCTTAA

Peptide Sequence

PEP ID

XP_016507311.1
PEP Infomation

PREDICTED: zingipain-1-like [Nicotiana tabacum]
Sequence

MALKFCRLSLVAILLVVGIFGFQATSRDLQVYSMLERHEKWMSNHGRVYKDDVEKAKRFN
IFKEHVDFIDSFNNDATHSYQLGLNKFADLTNEEFQSMVGKYNNLSFIPKTSNLQPFSYE
SKITIPDSWNWREKGAVTDVKDQGRCGSCWAFSAVAAVEGINQIKTGDLVSLSEQQLLDC
ENTNNDGCGGGIRTEAFEYIAENGGLTTESNYPYTGIPGTCDSQKAESSVVTISGYRSVD
ASESALLQAVANQPVSAGITIGSDEFRFYNGGIFNGKCGMTSRHAVTVVGYGTSTEDGIN
YWLVKNSWGEKWGEGGFMRMARDIEDGGVCGLATRASFPTA

Transcript Sequence

Gene sequence data has not been registered.